Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_4340 | Not Available | Negative | 2298961 - 2299287 | 12382.5 |
| hypothetical protein | JCM19237_4341 | Not Available | Negative | 2299248 - 2299493 | 9241.62 |
| membrane fusion component of tripartite multidrug resistance system | JCM19237_4342 | Not Available | Negative | 2299694 - 2300044 | 12864.9 |
| membrane fusion component of tripartite multidrug resistance system | JCM19237_4343 | Not Available | Negative | 2300062 - 2300565 | 18906.4 |
| hypothetical protein | JCM19237_4344 | Not Available | Negative | 2300765 - 2301553 | 29877.4 |
| rida/yer057c/uk114 superfamily group 2 yoab-like protein | JCM19237_4345 | Not Available | Positive | 2301873 - 2302181 | 10941.8 |
| hypothetical protein | JCM19237_4346 | Not Available | Positive | 2302460 - 2302738 | 10917.3 |
| hypothetical protein | JCM19237_4347 | Not Available | Positive | 2302740 - 2302919 | 6609.89 |
| ribosomal-protein-s18p-alanine acetyltransferase | JCM19237_4348 | Not Available | Positive | 2303298 - 2303543 | 9224.97 |
| putative efflux (pet) family inner membrane protein yccs | JCM19237_4349 | Not Available | Negative | 2303691 - 2305910 | 82673.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
