Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_4330 | Not Available | Negative | 2292339 - 2292728 | 15007.9 |
| spermidine n1-acetyltransferase | JCM19237_4331 | Not Available | Positive | 2293292 - 2293822 | 20935.9 |
| threonine efflux protein | JCM19237_4332 | Not Available | Negative | 2293945 - 2294586 | 22891.0 |
| hypothetical protein | JCM19237_4333 | Not Available | Positive | 2294834 - 2295292 | 16928.6 |
| membrane-bound lytic murein transglycosylase c precursor | JCM19237_4334 | Not Available | Negative | 2295397 - 2295786 | 14579.6 |
| membrane-bound lytic murein transglycosylase c precursor | JCM19237_4335 | Not Available | Negative | 2295786 - 2296547 | 29068.6 |
| predicted deacylase | JCM19237_4336 | Not Available | Positive | 2296845 - 2297906 | 38701.8 |
| transcriptional regulator marr family | JCM19237_4337 | Not Available | Negative | 2298028 - 2298486 | 17074.0 |
| hypothetical protein | JCM19237_4338 | Not Available | Negative | 2298486 - 2298719 | 8591.49 |
| hypothetical protein | JCM19237_4339 | Not Available | Negative | 2298734 - 2298931 | 7068.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
