Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug and toxin extrusion (mate) family efflux pump ydhe/norm homolog | JCM19237_4310 | Not Available | Positive | 2278340 - 2278903 | 19058.1 |
| multidrug and toxin extrusion (mate) family efflux pump ydhe/norm homolog | JCM19237_4311 | Not Available | Positive | 2278903 - 2279658 | 26862.0 |
| putative transporter | JCM19237_4312 | Not Available | Positive | 2280148 - 2280933 | 28670.5 |
| putative transporter | JCM19237_4313 | Not Available | Positive | 2280930 - 2281469 | 18746.5 |
| two-component sensor histidine kinase | JCM19237_4314 | Not Available | Positive | 2281480 - 2281680 | 7576.94 |
| sensor histidine kinase | JCM19237_4315 | Not Available | Positive | 2281688 - 2282806 | 41250.8 |
| putative chemotaxis protein chey | JCM19237_4316 | Not Available | Positive | 2282815 - 2283288 | 17856.2 |
| hypothetical protein | JCM19237_4317 | Not Available | Negative | 2283371 - 2283622 | 9596.69 |
| hypothetical protein | JCM19237_4318 | Not Available | Positive | 2283956 - 2284771 | 28963.5 |
| hypothetical protein | JCM19237_4319 | Not Available | Positive | 2285795 - 2285932 | 5222.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
