Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative surface protein | JCM19237_4290 | Not Available | Negative | 2265598 - 2266452 | 30710.1 |
| predicted signal transduction protein | JCM19237_4291 | Not Available | Negative | 2266705 - 2267037 | 12641.8 |
| predicted signal transduction protein | JCM19237_4292 | Not Available | Negative | 2267052 - 2267294 | 8913.78 |
| predicted signal transduction protein | JCM19237_4293 | Not Available | Negative | 2267291 - 2267626 | 12254.0 |
| uncharacterized protein | JCM19237_4294 | Not Available | Negative | 2267734 - 2267940 | 8110.96 |
| regulator of competence-specific genes | JCM19237_4295 | Not Available | Positive | 2268667 - 2269188 | 19565.8 |
| d-serine dehydratase transcriptional activator | JCM19237_4296 | Not Available | Positive | 2269209 - 2270204 | 37284.1 |
| hypothetical protein | JCM19237_4297 | Not Available | Negative | 2270399 - 2270656 | 9542.43 |
| hypothetical protein | JCM19237_4298 | Not Available | Negative | 2270668 - 2270940 | 9727.48 |
| d-lactate dehydrogenase | JCM19237_4299 | Not Available | Negative | 2271132 - 2272130 | 37072.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
