Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase c | JCM19237_4270 | Not Available | Positive | 2250406 - 2251017 | 23237.7 |
| ribosomal large subunit pseudouridine synthase c | JCM19237_4271 | Not Available | Positive | 2251032 - 2251358 | 12186.6 |
| maf/ycef/yhde family protein | JCM19237_4272 | Not Available | Negative | 2251453 - 2252034 | 21193.6 |
| hypothetical protein | JCM19237_4273 | Not Available | Positive | 2252373 - 2252870 | 18512.7 |
| lsu ribosomal protein l32p | JCM19237_4274 | Not Available | Positive | 2252895 - 2253065 | 6165.34 |
| phosphate:acyl-acp acyltransferase plsx | JCM19237_4275 | Not Available | Positive | 2253075 - 2254100 | 36775.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase | JCM19237_4276 | Not Available | Positive | 2254106 - 2254462 | 12566.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase | JCM19237_4277 | Not Available | Positive | 2254438 - 2254908 | 17296.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase | JCM19237_4278 | Not Available | Positive | 2254905 - 2255060 | 5434.45 |
| malonyl coa-acyl carrier protein transacylase | JCM19237_4279 | Not Available | Positive | 2255198 - 2256121 | 32171.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
