Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp binding protein sugr | JCM19237_5163 | Not Available | Positive | 172595 - 173503 | 34623.1 |
| hypothetical transmembrane protein | JCM19237_5164 | Not Available | Positive | 173500 - 174252 | 28382.6 |
| hypothetical protein | JCM19237_5165 | Not Available | Negative | 174471 - 174647 | 6546.09 |
| hypothetical protein | JCM19237_5166 | Not Available | Negative | 174671 - 174892 | 7714.29 |
| hypothetical protein | JCM19237_5167 | Not Available | Negative | 175473 - 175586 | 4028.18 |
| outer membrane protein assembly factor yaet precursor | JCM19237_5168 | Not Available | Positive | 175653 - 176255 | 21620.5 |
| outer membrane protein assembly factor yaet precursor | JCM19237_5169 | Not Available | Positive | 176292 - 176999 | 25808.8 |
| predicted membrane fusion protein (mfp) component | JCM19237_5170 | Not Available | Positive | 177052 - 177987 | 34475.7 |
| abc-type multidrug transport system permease component | JCM19237_5171 | Not Available | Positive | 178057 - 179268 | 43816.8 |
| abc-type multidrug transport system permease component | JCM19237_5172 | Not Available | Positive | 179265 - 179702 | 15745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
