Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein a | JCM19237_4220 | Not Available | Positive | 2202719 - 2203408 | 26159.3 |
| phage shock protein b | JCM19237_4221 | Not Available | Positive | 2203445 - 2203675 | 8746.8 |
| phage shock protein c | JCM19237_4222 | Not Available | Positive | 2203672 - 2204058 | 14835.1 |
| conserved protein ycjx | JCM19237_4223 | Not Available | Positive | 2204444 - 2205574 | 42886.6 |
| membrane protein ycjf | JCM19237_4224 | Not Available | Positive | 2205666 - 2206001 | 11901.8 |
| membrane protein ycjf | JCM19237_4225 | Not Available | Positive | 2205977 - 2206627 | 23339.5 |
| protein of unknown function duf882 | JCM19237_4226 | Not Available | Positive | 2206936 - 2207859 | 33364.8 |
| protein of unknown function duf882 | JCM19237_4227 | Not Available | Positive | 2207859 - 2208533 | 24970.6 |
| transcriptional repressor protein tyrr | JCM19237_4228 | Not Available | Positive | 2208693 - 2210228 | 57895.0 |
| ribosomal-protein-s5p-alanine acetyltransferase | JCM19237_4229 | Not Available | Positive | 2210990 - 2211577 | 22825.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
