Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | JCM19237_4200 | Not Available | Positive | 2187944 - 2188105 | 6033.16 |
| ssu ribosomal protein s1p | JCM19237_4201 | Not Available | Positive | 2188205 - 2189875 | 60547.9 |
| integration host factor beta subunit | JCM19237_4202 | Not Available | Positive | 2189948 - 2190238 | 10761.9 |
| inner membrane protein ycis | JCM19237_4203 | Not Available | Positive | 2190428 - 2190724 | 10970.9 |
| heat shock (predicted periplasmic) protein ycim precursor | JCM19237_4204 | Not Available | Positive | 2190731 - 2191900 | 44509.7 |
| orotidine 5'-phosphate decarboxylase | JCM19237_4205 | Not Available | Positive | 2192175 - 2192870 | 24845.1 |
| alkylphosphonate utilization operon protein phna | JCM19237_4206 | Not Available | Negative | 2193013 - 2193270 | 9120.09 |
| hypothetical protein | JCM19237_4207 | Not Available | Positive | 2194144 - 2194323 | 6777.57 |
| hypothetical protein | JCM19237_4208 | Not Available | Positive | 2194611 - 2195522 | 32705.0 |
| mgtc family | JCM19237_4209 | Not Available | Positive | 2195519 - 2195914 | 13195.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
