Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferases | JCM19237_4160 | Not Available | Positive | 2151943 - 2153148 | 45345.3 |
| hypothetical protein | JCM19237_4161 | Not Available | Positive | 2153130 - 2153297 | 6084.58 |
| hypothetical protein | JCM19237_4162 | Not Available | Positive | 2153303 - 2153857 | 19825.0 |
| diguanylate cyclase | JCM19237_4163 | Not Available | Negative | 2153985 - 2155688 | 64582.0 |
| ubiquitin-protein ligase | JCM19237_4164 | Not Available | Negative | 2156141 - 2157061 | 34276.7 |
| tyrosine-specific transport protein | JCM19237_4165 | Not Available | Negative | 2157365 - 2157781 | 14678.2 |
| tyrosine-specific transport protein | JCM19237_4166 | Not Available | Negative | 2157781 - 2158518 | 25981.7 |
| molybdopterin binding motif cina n-terminal domain | JCM19237_4167 | Not Available | Positive | 2158975 - 2160255 | 46087.0 |
| putrescine/ornithine antiporter pote | JCM19237_4168 | Not Available | Positive | 2160697 - 2162076 | 48972.1 |
| arginine decarboxylase catabolic | JCM19237_4169 | Not Available | Positive | 2162227 - 2162685 | 17385.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
