Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i betaJCM19237_4140Not AvailableNegative2139268 - 213970815559.9
predicted metal-dependent phosphoesterases php familyJCM19237_4141Not AvailablePositive2140047 - 214063721542.9
predicted metal-dependent phosphoesterases php familyJCM19237_4142Not AvailablePositive2140693 - 21409389287.88
hypothetical ycio protein tsac/yrdc paralogJCM19237_4143Not AvailablePositive2140935 - 214126712655.5
hypothetical ycio protein tsac/yrdc paralogJCM19237_4144Not AvailablePositive2141267 - 214155410280.2
ribosomal large subunit pseudouridine synthase bJCM19237_4145Not AvailablePositive2141720 - 214280241391.5
hypothetical proteinJCM19237_4146Not AvailableNegative2142931 - 21431648232.87
hypothetical proteinJCM19237_4147Not AvailableNegative2143170 - 214369418649.4
possible protease sohbJCM19237_4148Not AvailablePositive2143865 - 214422713390.5
possible protease sohbJCM19237_4149Not AvailablePositive2144224 - 214492525512.8

Displaying genes 2791 – 2800 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.