Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonoacetaldehyde hydrolase | JCM19237_4090 | Not Available | Positive | 2102226 - 2102477 | 9270.07 |
| phosphonoacetaldehyde hydrolase | JCM19237_4091 | Not Available | Positive | 2102453 - 2103055 | 21239.4 |
| transcriptional regulator merr family | JCM19237_4092 | Not Available | Positive | 2103281 - 2103520 | 9326.32 |
| hypothetical protein | JCM19237_4093 | Not Available | Positive | 2103502 - 2103645 | 5449.65 |
| transcriptional regulator merr family | JCM19237_4094 | Not Available | Positive | 2103651 - 2103791 | 5274.31 |
| d-ribulokinase | JCM19237_4095 | Not Available | Negative | 2103890 - 2104126 | 8944.84 |
| d-ribulokinase | JCM19237_4096 | Not Available | Negative | 2104123 - 2105418 | 47069.4 |
| ribose/xylose/arabinose/galactoside abc-type transport systems permease component 1 | JCM19237_4097 | Not Available | Negative | 2105497 - 2106492 | 34921.3 |
| ribose abc transport system permease protein rbsc | JCM19237_4098 | Not Available | Negative | 2106495 - 2106806 | 10445.2 |
| ribose abc transport system permease protein rbsc | JCM19237_4099 | Not Available | Negative | 2106794 - 2107492 | 25110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
