Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase beta subunit | JCM19237_1356 | Not Available | Positive | 2064667 - 2065194 | 19288.9 |
| methanol oxidation genes glmu-like | JCM19237_1357 | Not Available | Positive | 2065345 - 2065965 | 23210.0 |
| hypothetical protein | JCM19237_4052 | Not Available | Positive | 2066673 - 2067035 | 12768.4 |
| hypothetical protein | JCM19237_4053 | Not Available | Negative | 2067154 - 2067267 | 4271.45 |
| transcriptional regulator lysr family | JCM19237_4054 | Not Available | Negative | 2067283 - 2068035 | 27742.2 |
| nadph:quinone oxidoreductase | JCM19237_4055 | Not Available | Positive | 2068224 - 2069120 | 32027.1 |
| pts system fructose-specific iia /iib / iic component | JCM19237_4056 | Not Available | Positive | 2069882 - 2070313 | 15821.8 |
| pts system fructose-specific iibc component | JCM19237_4057 | Not Available | Positive | 2070331 - 2071221 | 30613.4 |
| pts system fructose-specific iibc component | JCM19237_4058 | Not Available | Positive | 2071287 - 2071727 | 15039.3 |
| alpha-1,2-mannosidase | JCM19237_4059 | Not Available | Positive | 2072360 - 2074831 | 92109.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
