Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_1346 | Not Available | Positive | 2058150 - 2058383 | 8948.88 |
| hypothetical protein | JCM19237_1347 | Not Available | Positive | 2058653 - 2059273 | 23851.3 |
| ggdef domain protein | JCM19237_1348 | Not Available | Positive | 2059348 - 2059908 | 20828.2 |
| ubiquitin-protein ligase | JCM19237_1349 | Not Available | Positive | 2060331 - 2061035 | 26874.9 |
| ubiquitin-protein ligase | JCM19237_1350 | Not Available | Positive | 2061029 - 2061631 | 22504.5 |
| tyrosyl-trna synthetase | JCM19237_1351 | Not Available | Negative | 2061847 - 2062062 | 7368.1 |
| tyrosyl-trna synthetase | JCM19237_1352 | Not Available | Negative | 2062014 - 2062478 | 17569.3 |
| tyrosyl-trna synthetase | JCM19237_1353 | Not Available | Negative | 2062445 - 2063029 | 21958.7 |
| hypothetical protein | JCM19237_1354 | Not Available | Negative | 2063089 - 2063529 | 16318.4 |
| transcriptional regulators lysr family | JCM19237_1355 | Not Available | Positive | 2063669 - 2064559 | 32789.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
