Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_1176 | Not Available | Negative | 1918909 - 1919919 | 39696.0 |
| na+/h+ antiporter nhac | JCM19237_1177 | Not Available | Negative | 1920525 - 1921970 | 50133.6 |
| galactose operon repressor | JCM19237_1178 | Not Available | Positive | 1922116 - 1923126 | 37443.8 |
| xylose isomerase | JCM19237_1179 | Not Available | Positive | 1923572 - 1924891 | 49373.2 |
| xylose abc transporter periplasmic xylose-binding protein xylf | JCM19237_1180 | Not Available | Positive | 1925412 - 1925936 | 19150.0 |
| xylose abc transporter periplasmic xylose-binding protein xylf | JCM19237_1181 | Not Available | Positive | 1925917 - 1926408 | 17426.7 |
| d-xylose transport atp-binding protein xylg | JCM19237_1182 | Not Available | Positive | 1926531 - 1927439 | 32873.9 |
| d-xylose transport atp-binding protein xylg | JCM19237_1183 | Not Available | Positive | 1927439 - 1928053 | 22137.0 |
| xylose abc transporter permease protein xylh | JCM19237_1184 | Not Available | Positive | 1928053 - 1929228 | 41583.2 |
| xylose activator xylr arac family | JCM19237_1185 | Not Available | Negative | 1929315 - 1929680 | 13764.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
