Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigz | JCM19237_5123 | Not Available | Positive | 145405 - 145959 | 21253.4 |
| hypothetical protein | JCM19237_5124 | Not Available | Negative | 146077 - 147123 | 39536.8 |
| hypothetical protein | JCM19237_5125 | Not Available | Negative | 147170 - 147352 | 6800.96 |
| hypothetical protein | JCM19237_5126 | Not Available | Negative | 147382 - 147948 | 20125.7 |
| hypothetical protein | JCM19237_5127 | Not Available | Negative | 148362 - 148559 | 7686.33 |
| hydrolase (had superfamily) | JCM19237_5128 | Not Available | Negative | 148829 - 149038 | 7264.62 |
| predicted hydrolase | JCM19237_5129 | Not Available | Negative | 148999 - 149637 | 23422.1 |
| hypothetical protein | JCM19237_5130 | Not Available | Negative | 149812 - 149964 | 5648.94 |
| hypothetical protein | JCM19237_5131 | Not Available | Negative | 150005 - 150715 | 27596.3 |
| hypothetical protein | JCM19237_5132 | Not Available | Negative | 150721 - 151707 | 35773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
