Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-cysteine ligase | JCM19237_5113 | Not Available | Positive | 136072 - 136497 | 14795.8 |
| glutamate-cysteine ligase | JCM19237_5114 | Not Available | Positive | 136494 - 137075 | 21837.8 |
| glutamate-cysteine ligase | JCM19237_5115 | Not Available | Positive | 137062 - 137676 | 22215.2 |
| atp-binding component of a transport system | JCM19237_5116 | Not Available | Positive | 137685 - 139490 | 65654.2 |
| lipid a export atp-binding/permease protein msba | JCM19237_5117 | Not Available | Positive | 139483 - 139809 | 12192.2 |
| lipid a export atp-binding/permease protein msba | JCM19237_5118 | Not Available | Positive | 139803 - 141380 | 58447.4 |
| glutathione synthetase | JCM19237_5119 | Not Available | Positive | 141403 - 142875 | 53346.6 |
| isoaspartyl dipeptidase | JCM19237_5120 | Not Available | Negative | 143026 - 143925 | 32226.1 |
| lysr family transcriptional regulator qsea | JCM19237_5121 | Not Available | Positive | 144391 - 145146 | 28270.2 |
| hypothetical protein | JCM19237_5122 | Not Available | Positive | 145211 - 145363 | 5342.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
