Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yheo-like pas domain | JCM19237_1006 | Not Available | Negative | 1777832 - 1778509 | 25034.0 |
| metallopeptidase | JCM19237_1007 | Not Available | Positive | 1778845 - 1780011 | 42908.3 |
| asp/glu racemase | JCM19237_1008 | Not Available | Positive | 1780097 - 1780858 | 27566.0 |
| metabolite transporter (dmt) superfamily | JCM19237_1009 | Not Available | Positive | 1781112 - 1782077 | 34790.3 |
| catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate | JCM19237_1010 | Not Available | Positive | 1782193 - 1783344 | 41763.8 |
| hypothetical protein | JCM19237_1011 | Not Available | Negative | 1783440 - 1783553 | 4379.47 |
| spindolin-related protein | JCM19237_1012 | Not Available | Negative | 1783626 - 1784912 | 46844.1 |
| hypothetical protein | JCM19237_1013 | Not Available | Negative | 1785061 - 1785306 | 9506.96 |
| hypothetical protein | JCM19237_1014 | Not Available | Negative | 1785303 - 1785788 | 17642.2 |
| hypothetical protein | JCM19237_1015 | Not Available | Positive | 1786172 - 1786837 | 25244.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
