Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-proline glycine betaine binding abc transporter protein prox | JCM19237_996 | Not Available | Negative | 1770725 - 1771237 | 18111.5 |
| l-proline glycine betaine abc transport system permease protein prow | JCM19237_997 | Not Available | Negative | 1771234 - 1771929 | 24518.4 |
| l-proline glycine betaine abc transport system permease protein prow | JCM19237_998 | Not Available | Negative | 1771923 - 1772312 | 14448.0 |
| l-proline glycine betaine abc transport system permease protein prov | JCM19237_999 | Not Available | Negative | 1772317 - 1773000 | 24998.0 |
| l-proline glycine betaine abc transport system permease protein prov | JCM19237_1000 | Not Available | Negative | 1772997 - 1773503 | 18593.8 |
| metabolite transporter (dmt) superfamily | JCM19237_1001 | Not Available | Positive | 1774589 - 1775407 | 29415.8 |
| diaminopropionate ammonia-lyase | JCM19237_1002 | Not Available | Negative | 1776165 - 1776356 | 6942.39 |
| diaminopropionate ammonia-lyase | JCM19237_1003 | Not Available | Negative | 1776383 - 1776532 | 5181.34 |
| diaminopropionate ammonia-lyase | JCM19237_1004 | Not Available | Negative | 1776520 - 1777338 | 29355.1 |
| bona fide rida/yjgf/tdcf/rutc subgroup | JCM19237_1005 | Not Available | Negative | 1777422 - 1777808 | 13730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
