Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | JCM19237_986 | Not Available | Positive | 1765396 - 1765545 | 5469.45 |
| membrane protein | JCM19237_987 | Not Available | Positive | 1765591 - 1765854 | 9458.52 |
| membrane protein | JCM19237_988 | Not Available | Positive | 1765845 - 1766006 | 5597.22 |
| hypothetical protein | JCM19237_989 | Not Available | Positive | 1766018 - 1766653 | 23439.4 |
| probable cytochrome-c peroxidase | JCM19237_990 | Not Available | Negative | 1766921 - 1767628 | 25568.0 |
| di-haem cytochrome c peroxidase | JCM19237_991 | Not Available | Negative | 1767628 - 1768023 | 14213.6 |
| hypothetical protein | JCM19237_992 | Not Available | Negative | 1768120 - 1768260 | 4628.5 |
| hypothetical protein | JCM19237_993 | Not Available | Positive | 1769017 - 1769244 | 8514.31 |
| ribosomal protein s6 glutaminyl transferase | JCM19237_994 | Not Available | Positive | 1769241 - 1770146 | 32655.1 |
| l-proline glycine betaine binding abc transporter protein prox | JCM19237_995 | Not Available | Negative | 1770228 - 1770731 | 18698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
