Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_2386 | Not Available | Negative | 1702922 - 1703110 | 7279.41 |
| hypothetical protein | JCM19237_2387 | Not Available | Positive | 1703270 - 1703647 | 13942.5 |
| hydroxymethylpyrimidine phosphate kinase thid | JCM19237_2388 | Not Available | Positive | 1703895 - 1704683 | 27506.5 |
| hydroxymethylpyrimidine abc transporter atpase component | JCM19237_2389 | Not Available | Positive | 1704733 - 1705527 | 28767.8 |
| hydroxymethylpyrimidine abc transporter transmembrane component | JCM19237_2390 | Not Available | Positive | 1705661 - 1706233 | 20920.7 |
| hydroxymethylpyrimidine abc transporter transmembrane component | JCM19237_2391 | Not Available | Positive | 1706254 - 1706367 | 4249.38 |
| hydroxymethylpyrimidine abc transporter substrate-binding component | JCM19237_2392 | Not Available | Positive | 1706464 - 1707483 | 36752.8 |
| thiaminase ii | JCM19237_2393 | Not Available | Positive | 1707507 - 1707866 | 13372.0 |
| thiaminase ii | JCM19237_2394 | Not Available | Positive | 1707863 - 1708177 | 11460.4 |
| hydroxyethylthiazole kinase | JCM19237_2395 | Not Available | Positive | 1708180 - 1708974 | 27423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
