Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative copper binding protein scsa | JCM19237_2376 | Not Available | Negative | 1693413 - 1693817 | 14687.8 |
| hypothetical protein | JCM19237_2377 | Not Available | Negative | 1694120 - 1694545 | 16643.1 |
| 50s ribosomal subunit maturation gtpase rbga | JCM19237_2378 | Not Available | Negative | 1695495 - 1696442 | 35901.6 |
| coproporphyrinogen iii oxidase | JCM19237_2379 | Not Available | Positive | 1696821 - 1697357 | 20205.3 |
| hypothetical radical sam family enzyme | JCM19237_2380 | Not Available | Positive | 1697351 - 1698814 | 55089.5 |
| hypothetical protein | JCM19237_2381 | Not Available | Negative | 1698850 - 1699278 | 16774.5 |
| hypothetical protein | JCM19237_2382 | Not Available | Positive | 1700062 - 1700223 | 6110.37 |
| hypothetical protein | JCM19237_2383 | Not Available | Negative | 1700816 - 1701367 | 20478.3 |
| hypothetical protein | JCM19237_2384 | Not Available | Negative | 1701563 - 1701847 | 11358.5 |
| hypothetical protein | JCM19237_2385 | Not Available | Negative | 1702030 - 1702761 | 27316.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
