Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt family | JCM19237_2346 | Not Available | Negative | 1670131 - 1670289 | 6010.28 |
| transglycosylase slt family | JCM19237_2347 | Not Available | Negative | 1670355 - 1670648 | 10929.9 |
| transglycosylase slt family | JCM19237_2348 | Not Available | Negative | 1670768 - 1671535 | 29357.5 |
| hypothetical protein | JCM19237_2349 | Not Available | Negative | 1671658 - 1671792 | 4909.71 |
| putative protein | JCM19237_2350 | Not Available | Negative | 1671789 - 1672775 | 37690.3 |
| ribonucleotide reductase of class iii anaerobic large subunit | JCM19237_2351 | Not Available | Positive | 1673121 - 1675151 | 76199.8 |
| ribonucleotide reductase of class iii anaerobic activating protein | JCM19237_2352 | Not Available | Positive | 1675316 - 1675783 | 17680.0 |
| eal domain | JCM19237_2353 | Not Available | Positive | 1676522 - 1677403 | 32306.1 |
| eal domain | JCM19237_2354 | Not Available | Positive | 1677397 - 1678515 | 41616.2 |
| hypothetical protein | JCM19237_2355 | Not Available | Positive | 1678712 - 1680085 | 50947.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
