Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase a | JCM19237_2336 | Not Available | Negative | 1660333 - 1660461 | 4851.82 |
| ribosomal large subunit pseudouridine synthase a | JCM19237_2337 | Not Available | Negative | 1660464 - 1661687 | 46122.4 |
| ribosomal large subunit pseudouridine synthase a | JCM19237_2338 | Not Available | Negative | 1661681 - 1662022 | 12903.5 |
| diguanylate cyclase | JCM19237_2339 | Not Available | Positive | 1662432 - 1663331 | 33690.8 |
| fumarate hydratase class ii | JCM19237_2340 | Not Available | Negative | 1663338 - 1663811 | 16552.1 |
| fumarate hydratase class ii | JCM19237_2341 | Not Available | Negative | 1663876 - 1664724 | 30391.2 |
| hypothetical protein | JCM19237_2342 | Not Available | Positive | 1665087 - 1665326 | 8879.61 |
| glycosidase | JCM19237_2343 | Not Available | Negative | 1665447 - 1666568 | 42068.9 |
| glucose-1-phosphate adenylyltransferase | JCM19237_2344 | Not Available | Positive | 1667245 - 1668468 | 45610.8 |
| glycogen synthase adp-glucose transglucosylase | JCM19237_2345 | Not Available | Positive | 1668500 - 1669972 | 54509.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
