Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_5093 | Not Available | Negative | 113671 - 113871 | 7100.57 |
| abc-type protease exporter membrane fusion protein (mfp) family component prte/apre | JCM19237_5094 | Not Available | Negative | 113970 - 114605 | 23253.9 |
| type i secretion system membrane fusion protein lapc | JCM19237_5095 | Not Available | Negative | 114623 - 115108 | 18166.3 |
| type i secretion system membrane fusion protein lapc | JCM19237_5096 | Not Available | Negative | 115077 - 115436 | 12802.3 |
| hypothetical protein | JCM19237_5097 | Not Available | Positive | 115736 - 115960 | 7548.64 |
| t1ss secreted agglutinin rtx | JCM19237_5098 | Not Available | Positive | 115951 - 116424 | 16031.9 |
| t1ss secreted agglutinin rtx | JCM19237_5099 | Not Available | Positive | 116435 - 117199 | 25893.1 |
| t1ss secreted agglutinin rtx | JCM19237_5100 | Not Available | Positive | 117193 - 118506 | 44676.3 |
| rtx toxins and related ca2+-binding proteins | JCM19237_5101 | Not Available | Positive | 118503 - 121094 | 87331.3 |
| rtx toxins and related ca2+-binding proteins | JCM19237_5102 | Not Available | Positive | 121106 - 122875 | 61771.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
