Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_2256 | Not Available | Positive | 1604355 - 1604762 | 14435.3 |
| ntp pyrophosphohydrolases including oxidative damage repair enzymes | JCM19237_2257 | Not Available | Positive | 1604752 - 1605222 | 17330.7 |
| hypothetical protein | JCM19237_2258 | Not Available | Negative | 1605352 - 1606140 | 29964.5 |
| hypothetical protein | JCM19237_2259 | Not Available | Positive | 1606856 - 1606975 | 4872.14 |
| hypothetical protein | JCM19237_2260 | Not Available | Positive | 1607222 - 1607389 | 6181.73 |
| utilization protein for unknown catechol-siderophore x | JCM19237_2261 | Not Available | Positive | 1607358 - 1608050 | 24694.3 |
| catechol siderophore abc transporter atp-binding component | JCM19237_2262 | Not Available | Negative | 1608172 - 1608888 | 26672.3 |
| iron compound abc uptake transporter permease protein piuc | JCM19237_2263 | Not Available | Negative | 1608935 - 1609060 | 4731.91 |
| iron compound abc uptake transporter permease protein piuc | JCM19237_2264 | Not Available | Negative | 1609036 - 1609884 | 31217.3 |
| catechol siderophore abc transporter permease component | JCM19237_2265 | Not Available | Negative | 1609877 - 1610632 | 27672.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
