Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain | JCM19237_5083 | Not Available | Negative | 105218 - 106321 | 42235.8 |
| type i secretion system atpase | JCM19237_5084 | Not Available | Negative | 106687 - 107472 | 28013.6 |
| type i secretion system atpase | JCM19237_5085 | Not Available | Negative | 107469 - 107930 | 16992.8 |
| type i secretion system atpase | JCM19237_5086 | Not Available | Negative | 107918 - 108280 | 13032.4 |
| type i secretion system atpase | JCM19237_5087 | Not Available | Negative | 108261 - 108977 | 26054.3 |
| membrane bound c-di-gmp receptor lapd | JCM19237_5088 | Not Available | Negative | 109071 - 109772 | 26631.6 |
| membrane bound c-di-gmp receptor lapd | JCM19237_5089 | Not Available | Negative | 109759 - 111033 | 46768.6 |
| t1ss associated transglutaminase-like cysteine proteinase lapp | JCM19237_5090 | Not Available | Negative | 111047 - 111919 | 33013.8 |
| hypothetical protein | JCM19237_5091 | Not Available | Negative | 111922 - 112452 | 19301.5 |
| type i secretion system outer membrane component lape | JCM19237_5092 | Not Available | Negative | 112585 - 113211 | 23623.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
