Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hmp-pp hydrolase (pyridoxal phosphatase) cof | JCM19237_2166 | Not Available | Positive | 1539675 - 1540115 | 16526.0 |
| hydrolase (had superfamily) | JCM19237_2167 | Not Available | Positive | 1540091 - 1540252 | 6046.05 |
| membrane protein | JCM19237_2168 | Not Available | Positive | 1540515 - 1541210 | 25679.9 |
| hypothetical protein | JCM19237_2169 | Not Available | Negative | 1541291 - 1541464 | 6341.8 |
| hypothetical protein | JCM19237_2170 | Not Available | Positive | 1541581 - 1541772 | 7374.58 |
| hypothetical protein | JCM19237_2171 | Not Available | Positive | 1541735 - 1542184 | 17403.7 |
| sodium-dependent transporter | JCM19237_2172 | Not Available | Positive | 1542805 - 1543749 | 32822.0 |
| threonine dehydratase | JCM19237_2173 | Not Available | Positive | 1543775 - 1544245 | 17331.5 |
| threonine dehydratase | JCM19237_2174 | Not Available | Positive | 1544242 - 1544769 | 18465.9 |
| hypothetical protein | JCM19237_2175 | Not Available | Positive | 1545005 - 1545307 | 11629.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
