Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction-modification system dna-methyltransferase subunit m | JCM19237_2136 | Not Available | Positive | 1514129 - 1515025 | 33195.6 |
| type i restriction-modification system dna-methyltransferase subunit m | JCM19237_2137 | Not Available | Positive | 1515001 - 1515705 | 26375.2 |
| type i restriction-modification system specificity subunit s | JCM19237_2138 | Not Available | Positive | 1515728 - 1516552 | 30734.0 |
| type i restriction-modification system specificity subunit s | JCM19237_2139 | Not Available | Positive | 1516611 - 1517126 | 19017.2 |
| hypothetical protein | JCM19237_2140 | Not Available | Positive | 1517500 - 1517808 | 11867.5 |
| mcrbc restriction endonuclease system mcrb subunit putative | JCM19237_2141 | Not Available | Positive | 1518074 - 1519453 | 53043.9 |
| mcrbc restriction endonuclease system mcrb subunit putative | JCM19237_2142 | Not Available | Positive | 1519485 - 1520501 | 38477.2 |
| putative endonuclease | JCM19237_2143 | Not Available | Positive | 1520492 - 1520776 | 10164.6 |
| hypothetical protein | JCM19237_2144 | Not Available | Positive | 1520782 - 1522080 | 48826.2 |
| hypothetical protein | JCM19237_2145 | Not Available | Positive | 1522259 - 1522582 | 12031.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
