Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted atp-dependent endonuclease of the old family | JCM19237_5073 | Not Available | Positive | 98589 - 100238 | 62367.0 |
| hypothetical protein | JCM19237_5074 | Not Available | Positive | 100242 - 101366 | 42848.1 |
| hypothetical protein | JCM19237_5075 | Not Available | Positive | 101469 - 101600 | 4620.84 |
| ribosomal large subunit pseudouridine synthase a | JCM19237_5076 | Not Available | Negative | 101618 - 101998 | 14108.8 |
| ribosomal large subunit pseudouridine synthase a | JCM19237_5077 | Not Available | Negative | 101962 - 102315 | 12913.8 |
| hypothetical protein | JCM19237_5078 | Not Available | Negative | 102457 - 102714 | 10056.6 |
| hypothetical protein | JCM19237_5079 | Not Available | Negative | 102898 - 103560 | 25135.2 |
| hypothetical protein | JCM19237_5080 | Not Available | Negative | 103557 - 103724 | 5840.0 |
| peptidase family m23/m37 | JCM19237_5081 | Not Available | Positive | 103951 - 104472 | 18613.5 |
| epih/gdmh-related protein | JCM19237_5082 | Not Available | Positive | 104541 - 105170 | 22959.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
