Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii/iv secretion system protein tadc | JCM19237_2107 | Not Available | Positive | 1488468 - 1489313 | 31676.9 |
| flp pilus assembly protein tadd | JCM19237_2108 | Not Available | Positive | 1489320 - 1490096 | 27788.1 |
| flp pilus assembly membrane protein tade | JCM19237_2109 | Not Available | Positive | 1490086 - 1490598 | 19813.4 |
| flp pilus assembly surface protein tadf atp/gtp-binding motif | JCM19237_2110 | Not Available | Positive | 1490582 - 1491136 | 20826.4 |
| protein tadg | JCM19237_2111 | Not Available | Positive | 1491138 - 1492667 | 58951.4 |
| outer membrane fibronectin-binding protein | JCM19237_2112 | Not Available | Positive | 1492699 - 1493349 | 23809.2 |
| cell wall endopeptidase family m23/m37 | JCM19237_2113 | Not Available | Negative | 1493501 - 1493899 | 14481.5 |
| hypothetical protein | JCM19237_2114 | Not Available | Negative | 1494100 - 1494309 | 7596.08 |
| cell wall endopeptidase family m23/m37 | JCM19237_2115 | Not Available | Negative | 1494263 - 1494781 | 19499.0 |
| hypothetical protein | JCM19237_2116 | Not Available | Positive | 1494806 - 1494934 | 4707.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
