Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein rcpc/cpab | JCM19237_2097 | Not Available | Positive | 1482340 - 1482804 | 17426.9 |
| flp pilus assembly protein rcpc/cpab | JCM19237_2098 | Not Available | Positive | 1482828 - 1483193 | 13284.5 |
| type ii/iv secretion system secretin rcpa/cpac | JCM19237_2099 | Not Available | Positive | 1483193 - 1484110 | 33866.5 |
| type ii/iv secretion system secretin rcpa/cpac | JCM19237_2100 | Not Available | Positive | 1484088 - 1484549 | 16912.7 |
| hypothetical protein | JCM19237_2101 | Not Available | Positive | 1484546 - 1484680 | 5003.4 |
| hypothetical protein | JCM19237_2102 | Not Available | Positive | 1484644 - 1485045 | 15498.4 |
| type ii/iv secretion system atpase tadz/cpae | JCM19237_2103 | Not Available | Positive | 1485049 - 1486293 | 46515.1 |
| type ii/iv secretion system atp hydrolase tada/virb11/cpaf tada subfamily | JCM19237_2104 | Not Available | Positive | 1486290 - 1487246 | 35454.1 |
| type ii/iv secretion system atp hydrolase tada/virb11/cpaf tada subfamily | JCM19237_2105 | Not Available | Positive | 1487243 - 1487554 | 11726.3 |
| flp pilus assembly protein tadb | JCM19237_2106 | Not Available | Positive | 1487560 - 1488468 | 34269.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
