Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chitinase | JCM19237_2017 | Not Available | Positive | 1420648 - 1422462 | 67199.1 |
| membrane protein | JCM19237_2018 | Not Available | Positive | 1422620 - 1423459 | 30000.2 |
| ribose abc transport system high affinity permease rbsd | JCM19237_2019 | Not Available | Positive | 1423875 - 1424321 | 16228.9 |
| hypothetical protein | JCM19237_2020 | Not Available | Positive | 1424299 - 1424433 | 5044.27 |
| homolog of fucose/glucose/galactose permeases | JCM19237_2021 | Not Available | Positive | 1424490 - 1425839 | 49242.3 |
| hypothetical protein | JCM19237_2022 | Not Available | Positive | 1425926 - 1426096 | 6329.67 |
| putative uncharacterized protein sty3991 | JCM19237_2023 | Not Available | Positive | 1426084 - 1426938 | 31967.1 |
| ribokinase | JCM19237_2024 | Not Available | Positive | 1427068 - 1427985 | 31967.1 |
| ribose operon repressor | JCM19237_2025 | Not Available | Positive | 1427998 - 1428741 | 27683.2 |
| ribose operon repressor | JCM19237_2026 | Not Available | Positive | 1428741 - 1429004 | 9649.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
