Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | JCM19237_6593 | Not Available | Positive | 1282084 - 1282491 | 14109.9 |
| cytidine deaminase | JCM19237_6594 | Not Available | Positive | 1282488 - 1282970 | 17019.2 |
| putative transporter dme family | JCM19237_6595 | Not Available | Positive | 1283118 - 1284008 | 32587.5 |
| hypothetical protein | JCM19237_6596 | Not Available | Negative | 1284071 - 1284226 | 5454.65 |
| phosphoribosylglycinamide formyltransferase 2 | JCM19237_6597 | Not Available | Positive | 1284245 - 1284643 | 14180.3 |
| phosphoribosylglycinamide formyltransferase 2 | JCM19237_6598 | Not Available | Positive | 1284597 - 1285418 | 29751.5 |
| thiopurine s-methyltransferase | JCM19237_6599 | Not Available | Negative | 1285503 - 1286147 | 24602.2 |
| hypothetical protein | JCM19237_6600 | Not Available | Negative | 1286471 - 1286638 | 6346.69 |
| hypothetical protein | JCM19237_6601 | Not Available | Negative | 1287043 - 1287192 | 5428.78 |
| hypothetical protein | JCM19237_6602 | Not Available | Positive | 1287316 - 1287453 | 4920.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
