Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_5043 | Not Available | Negative | 76247 - 76366 | 4660.86 |
| glutathione synthetase | JCM19237_5044 | Not Available | Positive | 76467 - 77945 | 55220.5 |
| hypothetical protein | JCM19237_5045 | Not Available | Positive | 78172 - 78477 | 11791.1 |
| hypothetical protein | JCM19237_5046 | Not Available | Positive | 78438 - 78704 | 9955.93 |
| hypothetical protein | JCM19237_5047 | Not Available | Negative | 78890 - 79006 | 4038.92 |
| hypothetical protein | JCM19237_5048 | Not Available | Positive | 79172 - 79321 | 5528.71 |
| l-fucose operon activator | JCM19237_5049 | Not Available | Positive | 79321 - 79836 | 19122.1 |
| fucose permease | JCM19237_5050 | Not Available | Positive | 79916 - 80563 | 23141.7 |
| fucose permease | JCM19237_5051 | Not Available | Positive | 80560 - 81156 | 21120.4 |
| l-fucose isomerase | JCM19237_5052 | Not Available | Positive | 81291 - 82808 | 56088.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
