Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent protein deacetylase of sir2 familyJCM19237_6533Not AvailableNegative1223990 - 12242629857.76
nad-dependent protein deacetylase of sir2 familyJCM19237_6534Not AvailableNegative1224322 - 122470214170.8
formate dehydrogenase -o gamma subunitJCM19237_6535Not AvailableNegative1225042 - 122583929958.0
formate dehydrogenase -o gamma subunitJCM19237_6536Not AvailableNegative1225884 - 12261148320.73
putative formate dehydrogenase iron-sulfur subunitJCM19237_6537Not AvailableNegative1226232 - 122665415004.8
formate dehydrogenase-o major subunitJCM19237_6538Not AvailableNegative1226861 - 122758927272.4
formate dehydrogenase-o major subunitJCM19237_6539Not AvailableNegative1227631 - 122949970028.7
formate dehydrogenase-o major subunitJCM19237_6540Not AvailableNegative1229526 - 12297176996.76
formate dehydrogenase subunit or accessory proteinJCM19237_6541Not AvailableNegative1229731 - 12299317329.6
hypothetical proteinJCM19237_6542Not AvailableNegative1229924 - 12300404686.63

Displaying genes 1651 – 1660 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.