Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport atp-binding protein pota | JCM19237_6523 | Not Available | Positive | 1215676 - 1216173 | 18813.1 |
| spermidine putrescine abc transporter permease component potb | JCM19237_6524 | Not Available | Positive | 1216157 - 1217014 | 32412.2 |
| spermidine putrescine abc transporter permease component potc | JCM19237_6525 | Not Available | Positive | 1217014 - 1217784 | 28230.7 |
| abc transporter periplasmic spermidine putrescine-binding protein potd | JCM19237_6526 | Not Available | Positive | 1217932 - 1218927 | 37389.4 |
| chitinase | JCM19237_6527 | Not Available | Positive | 1219111 - 1220013 | 33152.0 |
| chitinase | JCM19237_6528 | Not Available | Positive | 1220010 - 1220456 | 16186.8 |
| abc transporter periplasmic spermidine putrescine-binding protein potd | JCM19237_6529 | Not Available | Positive | 1220698 - 1221183 | 18423.8 |
| abc transporter periplasmic spermidine putrescine-binding protein potd | JCM19237_6530 | Not Available | Positive | 1221183 - 1221740 | 20761.9 |
| transcriptional regulators lysr family | JCM19237_6531 | Not Available | Negative | 1221823 - 1222716 | 33138.0 |
| hypothetical protein | JCM19237_6532 | Not Available | Positive | 1222908 - 1223327 | 15757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
