Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system periplasmic component | JCM19237_6513 | Not Available | Negative | 1207051 - 1208121 | 39892.2 |
| integral membrane sensor signal transduction histidine kinase | JCM19237_6514 | Not Available | Negative | 1208429 - 1209835 | 52355.6 |
| torcad operon transcriptional regulatory protein torr | JCM19237_6515 | Not Available | Negative | 1209925 - 1210632 | 26844.6 |
| pts system glucose-specific iib / iic component | JCM19237_6516 | Not Available | Positive | 1210896 - 1211087 | 6332.97 |
| pts system glucose-specific iib / iic component | JCM19237_6517 | Not Available | Positive | 1211230 - 1211520 | 10822.3 |
| pts system glucose-specific iib / iic component | JCM19237_6518 | Not Available | Positive | 1211505 - 1212284 | 28455.0 |
| hypothetical protein | JCM19237_6519 | Not Available | Negative | 1212516 - 1213067 | 20310.2 |
| putative bax protein | JCM19237_6520 | Not Available | Negative | 1213071 - 1213862 | 29556.1 |
| probable proline and glycine rich transmembrane protein gene in bax | JCM19237_6521 | Not Available | Negative | 1213859 - 1214668 | 29234.2 |
| putrescine transport atp-binding protein pota | JCM19237_6522 | Not Available | Positive | 1215057 - 1215608 | 20200.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
