Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein uup | JCM19237_6463 | Not Available | Positive | 1169919 - 1170644 | 27522.2 |
| hypothetical protein | JCM19237_6464 | Not Available | Positive | 1170644 - 1172782 | 76647.2 |
| ribosome modulation factor | JCM19237_6465 | Not Available | Positive | 1172962 - 1173135 | 6658.74 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba form | JCM19237_6466 | Not Available | Negative | 1173608 - 1174123 | 18841.9 |
| atp-dependent protease la type ii | JCM19237_6467 | Not Available | Negative | 1174192 - 1175859 | 61217.0 |
| macrodomain ter protein ycbg | JCM19237_6468 | Not Available | Positive | 1176102 - 1176560 | 17925.3 |
| hypothetical protein | JCM19237_6469 | Not Available | Positive | 1176751 - 1177059 | 11658.7 |
| putative dna-binding protein | JCM19237_6470 | Not Available | Positive | 1177153 - 1177560 | 14557.5 |
| hypothetical protein | JCM19237_6471 | Not Available | Negative | 1177820 - 1178074 | 9331.33 |
| hypothetical transcriptional regulator | JCM19237_6472 | Not Available | Negative | 1178351 - 1178752 | 15377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
