Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-specific glutamate dehydrogenase large form | JCM19237_6453 | Not Available | Positive | 1160170 - 1161315 | 42523.9 |
| nad-specific glutamate dehydrogenase large form | JCM19237_6454 | Not Available | Positive | 1161390 - 1162823 | 54389.0 |
| dihydroorotate dehydrogenase | JCM19237_6455 | Not Available | Positive | 1163150 - 1164160 | 36632.4 |
| hypothetical protein | JCM19237_6456 | Not Available | Positive | 1164210 - 1164383 | 6629.23 |
| hypothetical protein | JCM19237_6457 | Not Available | Positive | 1164474 - 1164773 | 11330.7 |
| hypothetical protein | JCM19237_6458 | Not Available | Positive | 1164739 - 1165014 | 10152.4 |
| 23s rrna (guanine-n-2-) -methyltransferase rlml | JCM19237_6459 | Not Available | Positive | 1166342 - 1168480 | 80500.8 |
| thiol-disulfide isomerase and thioredoxin | JCM19237_6460 | Not Available | Positive | 1168574 - 1168717 | 5274.17 |
| abc transporter atp-binding protein | JCM19237_6461 | Not Available | Positive | 1168724 - 1168858 | 4924.1 |
| abc transporter atp-binding protein uup | JCM19237_6462 | Not Available | Positive | 1168819 - 1169919 | 41733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
