Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_6343 | Not Available | Positive | 1077448 - 1077579 | 5063.06 |
| hypothetical protein | JCM19237_6344 | Not Available | Positive | 1077997 - 1078221 | 8721.41 |
| hypothetical protein | JCM19237_6345 | Not Available | Negative | 1079488 - 1080354 | 33385.9 |
| type iv pilus biogenesis protein pile | JCM19237_6346 | Not Available | Positive | 1081173 - 1081577 | 14755.5 |
| type iv fimbrial biogenesis protein fimt | JCM19237_6347 | Not Available | Positive | 1081582 - 1082037 | 16426.9 |
| type iv fimbrial biogenesis protein pilv | JCM19237_6348 | Not Available | Positive | 1082034 - 1082249 | 7653.24 |
| hypothetical protein | JCM19237_6349 | Not Available | Positive | 1082228 - 1082467 | 8877.36 |
| prepilin-type cleavage/methylation-like protein | JCM19237_6350 | Not Available | Positive | 1082457 - 1082951 | 17684.4 |
| type iv fimbrial biogenesis protein pilx | JCM19237_6351 | Not Available | Positive | 1083157 - 1085046 | 65644.5 |
| hypothetical protein | JCM19237_6352 | Not Available | Negative | 1085114 - 1085248 | 5345.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
