Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| di-/tripeptide transporter | JCM19237_6272 | Not Available | Positive | 1019158 - 1019703 | 19364.0 |
| hypothetical protein | JCM19237_6274 | Not Available | Positive | 1020219 - 1020332 | 4371.0 |
| hypothetical protein | JCM19237_6275 | Not Available | Positive | 1020466 - 1021275 | 30944.5 |
| ribonucleotide reductase of class ii (coenzyme b12-dependent) alpha subunit | JCM19237_6276 | Not Available | Negative | 1021387 - 1022085 | 25820.9 |
| ribonucleotide reductase of class ii (coenzyme b12-dependent) | JCM19237_6277 | Not Available | Negative | 1022106 - 1024256 | 80431.1 |
| thiol-disulfide isomerase | JCM19237_6278 | Not Available | Negative | 1024586 - 1024867 | 10645.3 |
| thiol-disulfide isomerase | JCM19237_6279 | Not Available | Negative | 1024888 - 1025211 | 11587.2 |
| putative heat shock protein yegd | JCM19237_6280 | Not Available | Positive | 1025471 - 1026823 | 49459.2 |
| high potential iron-sulfur protein | JCM19237_6281 | Not Available | Negative | 1026950 - 1027255 | 10980.9 |
| hydrolase haloacid dehalogenase-like family | JCM19237_6282 | Not Available | Positive | 1027708 - 1028364 | 24065.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
