Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | JCM19237_6252 | Not Available | Positive | 1004035 - 1004163 | 4525.5 |
| fumarylacetoacetate hydrolase family protein | JCM19237_6253 | Not Available | Positive | 1004378 - 1005058 | 25319.6 |
| maleylacetoacetate isomerase | JCM19237_6254 | Not Available | Positive | 1005102 - 1005677 | 21860.7 |
| acetoacetyl-coa synthetase | JCM19237_6255 | Not Available | Positive | 1005823 - 1006836 | 37278.6 |
| acetoacetyl-coa synthetase | JCM19237_6256 | Not Available | Positive | 1006809 - 1007063 | 9388.11 |
| acetoacetyl-coa synthetase | JCM19237_6257 | Not Available | Positive | 1007294 - 1007992 | 25788.2 |
| putative metal chaperone | JCM19237_6258 | Not Available | Positive | 1008161 - 1009147 | 36375.5 |
| tldd protein | JCM19237_6259 | Not Available | Positive | 1009357 - 1010739 | 49503.8 |
| tlde protein | JCM19237_6260 | Not Available | Positive | 1010739 - 1011563 | 29609.5 |
| tlde protein | JCM19237_6261 | Not Available | Positive | 1011566 - 1011976 | 14354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
