Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thiamine biosynthesis lipoprotein | JCM19237_5003 | Not Available | Positive | 41726 - 42676 | 34875.9 |
| hypothetical protein | JCM19237_5004 | Not Available | Positive | 42824 - 43225 | 14821.3 |
| sodium-choline symporter | JCM19237_5005 | Not Available | Negative | 43315 - 45024 | 61834.0 |
| alpha-galactosidase | JCM19237_5006 | Not Available | Negative | 45162 - 45710 | 20573.0 |
| alpha-galactosidase | JCM19237_5007 | Not Available | Negative | 45707 - 47266 | 58864.6 |
| transcriptional repressor of the lac operon | JCM19237_5008 | Not Available | Positive | 47545 - 48615 | 38066.5 |
| putative drug efflux protein | JCM19237_5009 | Not Available | Negative | 48729 - 49838 | 37938.4 |
| transcriptional regulator lysr family | JCM19237_5010 | Not Available | Positive | 50103 - 50459 | 13465.4 |
| transcriptional regulator lysr family | JCM19237_5011 | Not Available | Positive | 50435 - 51007 | 21081.6 |
| transcriptional regulator tetr family | JCM19237_5012 | Not Available | Positive | 51210 - 51749 | 20138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
