Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_6122 | Not Available | Negative | 911948 - 912139 | 7329.55 |
| hypothetical protein | JCM19237_6123 | Not Available | Negative | 912223 - 912438 | 8311.42 |
| hypothetical protein | JCM19237_6124 | Not Available | Negative | 912644 - 913246 | 21425.0 |
| hypothetical protein | JCM19237_6125 | Not Available | Negative | 913354 - 913707 | 13663.6 |
| hypothetical protein | JCM19237_6126 | Not Available | Negative | 913680 - 915320 | 62428.5 |
| transcriptional regulator lysr family | JCM19237_6127 | Not Available | Negative | 915454 - 916326 | 32461.2 |
| mate family of mdr efflux pumps | JCM19237_6128 | Not Available | Positive | 916703 - 917896 | 42724.8 |
| chitinase | JCM19237_6129 | Not Available | Positive | 918387 - 919103 | 25790.7 |
| chitinase | JCM19237_6130 | Not Available | Positive | 919100 - 920995 | 69203.0 |
| methyl-accepting chemotaxis protein | JCM19237_6131 | Not Available | Negative | 921879 - 923171 | 48064.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
