Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein-s-isoprenylcysteine methyltransferase | JCM19237_6102 | Not Available | Negative | 899106 - 899531 | 15978.9 |
| hypothetical protein | JCM19237_6103 | Not Available | Positive | 899683 - 899826 | 5494.85 |
| predicted metal-dependent hydrolase | JCM19237_6104 | Not Available | Positive | 899792 - 900190 | 15409.8 |
| hypothetical protein | JCM19237_6105 | Not Available | Positive | 900306 - 900731 | 16255.7 |
| l-2-hydroxyglutarate oxidase | JCM19237_6106 | Not Available | Negative | 900850 - 901734 | 32625.4 |
| l-2-hydroxyglutarate oxidase | JCM19237_6107 | Not Available | Negative | 901722 - 902141 | 15051.8 |
| conserved domain protein | JCM19237_6108 | Not Available | Negative | 902292 - 902807 | 19145.0 |
| ubiquinone/menaquinone biosynthesis methyltransferase ubie | JCM19237_6109 | Not Available | Negative | 902822 - 903595 | 28584.8 |
| putative protein-s-isoprenylcysteine methyltransferase | JCM19237_6110 | Not Available | Negative | 903757 - 904089 | 12302.2 |
| 2,4-dienoyl-coa reductase | JCM19237_6111 | Not Available | Negative | 904435 - 904692 | 9375.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
