Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone acetyltransferase hpa2 and related acetyltransferases | JCM19237_6022 | Not Available | Positive | 843272 - 843769 | 18305.9 |
| peptidyl-prolyl cis-trans isomerase ppic | JCM19237_6023 | Not Available | Negative | 843877 - 844203 | 11843.6 |
| hypothetical protein | JCM19237_6024 | Not Available | Negative | 844393 - 845079 | 25455.9 |
| isochorismatase | JCM19237_6025 | Not Available | Positive | 845401 - 845547 | 5299.7 |
| isochorismatase | JCM19237_6026 | Not Available | Positive | 845541 - 845939 | 14400.6 |
| anaerobic dimethyl sulfoxide reductase chain c | JCM19237_6027 | Not Available | Negative | 846030 - 846155 | 4320.54 |
| anaerobic dimethyl sulfoxide reductase chain c | JCM19237_6028 | Not Available | Negative | 846152 - 846790 | 23233.1 |
| multidrug transporter putative | JCM19237_6029 | Not Available | Negative | 847047 - 847619 | 19520.3 |
| multidrug transporter putative | JCM19237_6030 | Not Available | Negative | 847604 - 847861 | 9395.23 |
| multidrug transporter putative | JCM19237_6031 | Not Available | Negative | 847876 - 848454 | 20180.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
