Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_6002 | Not Available | Negative | 824611 - 825189 | 21331.4 |
| hypothetical protein | JCM19237_6003 | Not Available | Negative | 825356 - 825712 | 13087.2 |
| glycerophosphoryl diester phosphodiesterase | JCM19237_6004 | Not Available | Positive | 826264 - 826971 | 25508.6 |
| atp-dependent rna helicase vva0939 | JCM19237_6005 | Not Available | Positive | 827272 - 828567 | 48493.7 |
| carbohydrate kinase | JCM19237_6006 | Not Available | Negative | 828749 - 829627 | 31343.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase | JCM19237_6007 | Not Available | Negative | 829773 - 830579 | 28708.7 |
| 3-oxoacyl-[acyl-carrier-protein] synthase | JCM19237_6008 | Not Available | Negative | 830579 - 831631 | 37870.2 |
| transcriptional regulator arac family | JCM19237_6009 | Not Available | Positive | 831891 - 832541 | 24573.4 |
| transcriptional regulator arac family | JCM19237_6010 | Not Available | Positive | 832568 - 832708 | 5442.57 |
| hypothetical protein | JCM19237_6011 | Not Available | Positive | 832914 - 833429 | 19577.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
