Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-phosphate guanylyltransferase | JCM19237_5992 | Not Available | Negative | 819806 - 819922 | 4272.14 |
| adenosylcobinamide-phosphate guanylyltransferase | JCM19237_5993 | Not Available | Negative | 819874 - 820329 | 16822.2 |
| hypothetical protein | JCM19237_5994 | Not Available | Positive | 820526 - 820903 | 13906.6 |
| hypothetical protein | JCM19237_5995 | Not Available | Negative | 821164 - 821349 | 6993.61 |
| beta-ketoadipate enol-lactone hydrolase putative | JCM19237_5996 | Not Available | Positive | 821365 - 821994 | 24348.1 |
| hypothetical protein | JCM19237_5997 | Not Available | Negative | 822117 - 822230 | 4284.28 |
| beta-ketoadipate enol-lactone hydrolase | JCM19237_5998 | Not Available | Negative | 822187 - 822834 | 23431.4 |
| beta-ketoadipate enol-lactone hydrolase | JCM19237_5999 | Not Available | Negative | 822810 - 822965 | 6013.3 |
| mate family of mdr efflux pumps | JCM19237_6000 | Not Available | Negative | 823015 - 823629 | 21879.2 |
| mate family of mdr efflux pumps | JCM19237_6001 | Not Available | Negative | 823626 - 824288 | 24069.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
