Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | ABT58_21345 | Not Available | Negative | 4904754 - 4905416 | 24843.7 |
| abc transporter permease | ABT58_21355 | Not Available | Positive | 4906635 - 4907405 | 27838.8 |
| pantoate--beta-alanine ligase | ABT58_21360 | Not Available | Negative | 4907484 - 4908365 | 32885.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ABT58_21365 | Not Available | Negative | 4908375 - 4909169 | 28499.5 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | ABT58_21370 | Not Available | Negative | 4909198 - 4909683 | 17823.3 |
| poly(a) polymerase | ABT58_21375 | Not Available | Negative | 4909680 - 4911053 | 53103.4 |
| glutamyl-trna synthetase | ABT58_21380 | Not Available | Negative | 4911157 - 4912041 | 32407.6 |
| rna polymerase-binding transcription factor | ABT58_21385 | Not Available | Negative | 4912116 - 4912565 | 17155.4 |
| transcriptional regulator | ABT58_21390 | Not Available | Negative | 4912702 - 4913406 | 26005.9 |
| atp-dependent helicase hrpb | ABT58_21400 | Not Available | Positive | 4914144 - 4916624 | 90048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
