Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | JCM19237_5982 | Not Available | Positive | 813896 - 814066 | 6437.79 |
| amino acid abc transporter permease protein | JCM19237_5983 | Not Available | Positive | 814081 - 814905 | 30571.6 |
| lysine-arginine-ornithine-binding periplasmic protein precursor | JCM19237_5984 | Not Available | Positive | 815001 - 815288 | 10280.7 |
| lysine-arginine-ornithine-binding periplasmic protein precursor | JCM19237_5985 | Not Available | Positive | 815285 - 815497 | 7546.04 |
| lysine-arginine-ornithine-binding periplasmic protein precursor | JCM19237_5986 | Not Available | Positive | 815499 - 815807 | 12076.0 |
| amino acid abc transporter permease protein | JCM19237_5987 | Not Available | Positive | 815907 - 816632 | 26900.9 |
| amino acid abc transporter permease protein | JCM19237_5988 | Not Available | Positive | 816592 - 816735 | 5283.56 |
| putative acetyltransferase | JCM19237_5989 | Not Available | Negative | 816807 - 817250 | 16964.1 |
| cobyric acid synthase | JCM19237_5990 | Not Available | Negative | 817552 - 819030 | 52986.7 |
| alpha-ribazole-5'-phosphate phosphatase | JCM19237_5991 | Not Available | Negative | 819134 - 819757 | 23623.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
